visual molecular dynamics vmd software Search Results


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Molecular Dynamics Inc storm phosphorimager
Storm Phosphorimager, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Molecular Dynamics Inc visual molecular dynamics vmd
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Molecular Dynamics Inc model 400e phosphorimager
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
Model 400e Phosphorimager, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Molecular Dynamics Inc typhoon 8600 variable mode imager
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
Typhoon 8600 Variable Mode Imager, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Molecular Dynamics Inc discovery studio visualizer 2016
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
Discovery Studio Visualizer 2016, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Molecular Dynamics Inc desplazamiento cuadrático medio msd y el coeficiente de difusión se realizaron utilizando el programa visual molecular dynamics
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
Desplazamiento Cuadrático Medio Msd Y El Coeficiente De Difusión Se Realizaron Utilizando El Programa Visual Molecular Dynamics, supplied by Molecular Dynamics Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Schrodinger LLC visual molecular dynamics (vmd 1.9.3
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
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BioCore Inc visualization tool vmd
FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model <t>400E</t> <t>Phosphorimager.</t>
Visualization Tool Vmd, supplied by BioCore Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model 400E Phosphorimager.

Journal: Molecular and Cellular Biology

Article Title: Platelet-derived growth factor stimulation of GTPase-activating protein tyrosine phosphorylation in control and c-H-ras-expressing NIH 3T3 cells correlates with p21ras activation.

doi: 10.1128/mcb.12.9.3903

Figure Lengend Snippet: FIG. 2. Induction by PDGF of the tyrosine phosphorylation of a large percentage of cellular GAP. (A) Anti-GAP immunoblot analy- sis of PDGF-stimulated whole cell lysates. The amount of protein used per lane is noted at the bottom. (B) Anti-GAP immunoblot of anti-P-Tyr-recovered GAP from PDGF-stimulated cells. Aliquots of cell lysates containing the indicated amounts of protein were immu- noprecipitated with an excess amount of anti-P-Tyr (lanes la, 2a, and 3a). Following the first immunoprecipitation, fresh anti-P-Tyr was added to supernatants and the immunoprecipitation was re- peated (lanes lb, 2b, and 3b). It should be noted that >90% of the proteins recognized by anti-P-Tyr were recovered in the first immu- noprecipitation step. Comparison of the intensity of GAP in the anti-P-Tyr-recovered samples (a plus b lanes) with that in whole cell lysate blot was used to estimate the percentage of cellular GAP which was tyrosine phosphorylated. Anti-P-Tyr-recoverable GAP was calculated to be between 37 and 52% of total cellular GAP following quantitation of bound radioactivity by using a Molecular Dynamics model 400E Phosphorimager.

Article Snippet: Immunoreactive GAP was visualized by 12I-protein A and quantitated by using a Molecular Dynamics model 400E Phosphorimager.

Techniques: Phospho-proteomics, Western Blot, Immunoprecipitation, Comparison, Quantitation Assay, Radioactivity